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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
175
DNase-seq
2
ATAC-seq
Assay category
177
DNA accessibility
DNA binding
Date released
163
June, 2019
6
November, 2018
5
October, 2019
1
August, 2017
1
March, 2019
1
October, 2017
Available data
1284
bam
1231
bigWig
1161
tsv
398
bed narrowPeak
185
bigBed narrowPeak
182
bed bed3+
177
bed broadPeak
175
bigBed broadPeak
173
fastq
161
txt
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
17
bedpe bed3+
15
hic
10
bed bed3
7
bed bedgraph
5
csv
2
ibed
1
bedpe
1
hdf5
Organism
177
Homo sapiens
Biosample type
175
tissue
primary cell
1
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
9
pancreas
5
blood vessel
5
vasculature
4
artery
3
connective tissue
3
eye
liver
2
adipose tissue
2
nerve
1
spleen
Project
177
AMP
Genome assembly (visualization)
176
GRCh38
160
hg19
Lab
175
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
primary cell
organ_slims!
liver
BIOSAMPLE
ASSAY
177 results
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DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 38 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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