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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
201
DNase-seq
24
ATAC-seq
4
FAIRE-seq
Assay category
DNA binding
229
DNA accessibility
Date released
187
June, 2019
14
September, 2018
October, 2019
10
August, 2017
10
November, 2018
5
September, 2017
2
July, 2019
1
November, 2020
Available data
1783
bam
1728
bigWig
1584
tsv
501
fastq
457
bed narrowPeak
229
bigBed narrowPeak
212
bed bed3+
201
bed broadPeak
199
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
vcf
Organism
229
Homo sapiens
Biosample type
179
tissue
49
primary cell
1
in vitro differentiated cells
Organ
79
kidney
36
epithelium
33
brain
33
musculature of body
32
limb
31
pancreas
30
heart
18
ureter
10
connective tissue
7
vasculature
6
liver
5
blood vessel
4
eye
3
adipose tissue
2
artery
1
spleen
Project
229
AMP
Genome assembly (visualization)
223
GRCh38
206
hg19
Lab
229
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
DNA binding
lab.title!
Karen Mohlke, UNC
month_released!
October, 2019
BIOSAMPLE
ASSAY
229 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 39 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 21 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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