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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
1
GRO-seq
Assay category
DNA binding
14
Transcription
Date released
8
August, 2021
4
February, 2018
2
May, 2021
1
January, 2018
Available data
15
bigWig
14
bam
14
tsv
5
fastq
Organism
15
Homo sapiens
Biosample type
8
cell line
7
in vitro differentiated cells
Organ
696
pancreas
363
epithelium
294
kidney
199
heart
196
liver
76
connective tissue
74
vasculature
71
blood vessel
68
brain
57
musculature of body
56
eye
50
limb
47
artery
32
adipose tissue
20
lung
18
ureter
15
embryo
9
blood
9
bodily fluid
9
bone element
8
nerve
8
skeleton
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
1
hg18
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
lab.title!
Karen Mohlke, UNC
month_released!
February, 2021
BIOSAMPLE
ASSAY
15 results
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total RNA-seq
GRO-seq
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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