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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
2
small RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
399
Transcription
DNA binding
8
DNA accessibility
6
DNA methylation
Date released
386
February, 2021
10
July, 2019
7
August, 2017
2
February, 2020
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
404
bigWig
403
bam
399
tsv
6
bed narrowPeak
6
fastq
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
414
Homo sapiens
Biosample type
415
tissue
2
primary cell
Organ
473
connective tissue
415
adipose tissue
388
pancreas
272
kidney
206
liver
190
heart
158
bone element
60
blood vessel
60
vasculature
56
brain
56
limb
54
eye
53
musculature of body
45
artery
20
lung
18
ureter
16
skeleton
15
epithelium
8
nerve
5
spleen
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
415
AMP
Genome assembly (visualization)
405
hg19
404
GRCh38
Lab
415
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
month_released!
August, 2018
BIOSAMPLE
ASSAY
415 results
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total RNA-seq
ATAC-seq
WGBS
DNase-seq
small RNA-seq
RNA microarray
pCHi-C
tissue
adipose tissue
382
3
3
1
subcutaneous adipose tissue
7
1
1
1
omental fat pad
5
1
2
1
subcutaneous abdominal adipose tissue
3
visceral abdominal adipose tissue
3
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