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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
170
DNase-seq
Assay category
170
DNA accessibility
DNA binding
Date released
155
June, 2019
9
November, 2018
3
October, 2019
2
August, 2017
1
November, 2020
Available data
1741
bam
1716
bigWig
1593
tsv
477
fastq
410
bed narrowPeak
205
bigBed narrowPeak
183
bed bed3+
172
bed broadPeak
170
bigBed broadPeak
154
txt
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
19
zippedFastqFolder
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
170
Homo sapiens
Biosample type
140
tissue
28
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
170
AMP
Genome assembly (visualization)
169
GRCh38
147
hg19
Lab
170
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_slims!
DNA binding
month_released!
May, 2022
organ_slims!
limb
BIOSAMPLE
ASSAY
170 results
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Clear Filters
DNase-seq
tissue
heart
18
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
+ See 33 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 18 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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