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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
89
Transcription
15
DNA methylation
6
DNA accessibility
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
168
July, 2018
110
August, 2017
108
July, 2019
62
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
16
January, 2021
15
February, 2018
15
May, 2023
15
November, 2020
10
December, 2019
9
November, 2018
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
103
fastq
97
bam
97
bigWig
89
tsv
6
bed bedMethyl
6
bed narrowPeak
6
bigBed bedMethyl
6
bigBed narrowPeak
Organism
110
Homo sapiens
Biosample type
106
tissue
4
primary cell
Organ
93
pancreas
7
adipose tissue
7
connective tissue
5
liver
4
musculature of body
3
epithelium
Project
110
AMP
Genome assembly (visualization)
99
hg19
96
GRCh38
Lab
110
AMP-T2D consortium
assay_slims!
DNA binding
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
110 results
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Clear Filters
total RNA-seq
WGBS
RRBS
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
skeletal muscle myoblast
1
See all biosamples
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