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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
22
ATAC-seq
6
WGBS
Assay category
563
Transcription
49
DNA accessibility
DNA binding
6
DNA methylation
Date released
187
June, 2019
140
May, 2022
105
February, 2023
100
May, 2020
82
August, 2021
55
February, 2021
35
July, 2019
35
May, 2021
33
October, 2019
26
August, 2017
26
November, 2019
17
November, 2018
16
January, 2021
14
September, 2018
11
May, 2023
10
April, 2020
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
33
fastq
18
bam
18
bed narrowPeak
6
tsv
4
bed bedgraph
2
bed bed3
1
bigWig
Organism
55
Homo sapiens
Biosample type
34
primary cell
9
cell line
8
tissue
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
epithelium
6
limb
6
pancreas
5
connective tissue
1
liver
Project
33
HPAP
22
AMP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
33
Klaus Kaestner, Upenn
22
AMP-T2D consortium
Audit category:
27
audit script error
1
inconsistent replicate
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
55 results
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snATAC-seq
ATAC-seq
WGBS
primary cell
Langerhans cell
27
pancreatic alpha cell
6
osteoblast
1
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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in vitro differentiated cells
adipocyte
4
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