Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
14
DNase-seq
6
WGBS
Assay category
26
Transcription
14
DNA accessibility
DNA binding
6
DNA methylation
Date released
80
May, 2022
52
February, 2023
40
September, 2018
33
April, 2018
33
July, 2018
32
February, 2021
22
May, 2021
19
September, 2020
14
June, 2019
13
July, 2019
11
October, 2019
7
August, 2020
6
December, 2019
6
November, 2020
5
March, 2020
5
September, 2017
3
August, 2017
3
August, 2018
3
November, 2019
3
October, 2022
2
August, 2021
2
October, 2018
1
June, 2018
Available data
40
bam
40
bigWig
32
tsv
14
bed bed3+
14
bed broadPeak
14
bed narrowPeak
14
bigBed broadPeak
14
bigBed narrowPeak
6
fastq
Organism
46
Homo sapiens
Biosample type
26
cell line
20
primary cell
Organ
461
connective tissue
387
adipose tissue
150
bone element
90
heart
86
kidney
67
vasculature
65
blood vessel
62
artery
46
epithelium
38
limb
36
pancreas
33
musculature of body
30
brain
18
ureter
8
skeleton
5
liver
4
eye
Project
40
AMP
6
HPAP
Genome assembly (visualization)
40
GRCh38
34
hg19
Lab
40
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
27
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
46 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
DNase-seq
WGBS
cell line
EndoC_BH1
26
primary cell
pancreatic alpha cell
6
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 8 more…
See all biosamples
Download