Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
pCHi-C
15
total RNA-seq
10
Hi-C
Assay category
15
Transcription
10
3D chromatin structure
DNA accessibility
DNA binding
Date released
658
February, 2021
200
May, 2021
194
August, 2021
191
May, 2020
168
July, 2018
104
August, 2017
101
May, 2022
100
February, 2023
100
July, 2019
57
March, 2020
56
September, 2020
49
April, 2018
47
September, 2023
39
October, 2019
27
September, 2018
25
February, 2020
22
November, 2019
15
February, 2018
14
November, 2020
10
December, 2019
9
April, 2020
8
November, 2018
5
January, 2018
5
January, 2019
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
2
October, 2018
1
December, 2018
1
March, 2019
Available data
43
tsv
13
bam
13
bigWig
12
bedpe bed3+
10
hic
2
ibed
Organism
57
Homo sapiens
Biosample type
36
tissue
8
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
7
heart
7
pancreas
5
musculature of body
4
blood vessel
4
vasculature
3
epithelium
3
liver
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
53
AMP
4
T1D
Genome assembly (visualization)
25
hg19
13
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
assay_slims!
DNA binding
DNA accessibility
BIOSAMPLE
ASSAY
57 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
total RNA-seq
Hi-C
tissue
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
liver
1
1
1
+ See 16 more…
cell line
EndoC_BH1
2
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
1
lymphocyte of B lineage (iPSC)
1
1
1
embryonic stem cell
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download