Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
DNase-seq
Assay category
202
DNA accessibility
DNA binding
Date released
183
June, 2019
9
November, 2018
7
October, 2019
2
August, 2017
1
November, 2020
Available data
1810
bam
1775
bigWig
1595
tsv
501
fastq
461
bed narrowPeak
237
bigBed narrowPeak
216
bed bed3+
204
bed broadPeak
202
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
202
Homo sapiens
Biosample type
173
tissue
27
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
202
AMP
Genome assembly (visualization)
201
GRCh38
179
hg19
Lab
202
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
DNA binding
organ_slims!
eye
BIOSAMPLE
ASSAY
202 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 38 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download