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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
8
ATAC-seq
7
total RNA-seq
Hi-C
1
WGBS
Assay category
DNA binding
44
DNA accessibility
7
Transcription
1
DNA methylation
Date released
32
June, 2019
10
October, 2019
6
February, 2021
3
February, 2020
1
July, 2019
Available data
49
bam
44
bed narrowPeak
43
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
52
tissue
Organ
719
pancreas
530
connective tissue
418
adipose tissue
387
epithelium
301
kidney
256
heart
235
liver
159
bone element
129
vasculature
126
blood vessel
107
artery
65
brain
56
eye
52
limb
51
musculature of body
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
3
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
49
GRCh38
48
hg19
Lab
52
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
Hi-C
BIOSAMPLE
ASSAY
52 results
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DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
tibial nerve
2
1
5
tibial artery
2
1
1
distal epiphysis of femur
1
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