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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
DNA binding
8
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
6
February, 2021
6
October, 2019
5
July, 2019
3
February, 2020
Available data
49
bam
44
bed narrowPeak
43
bigWig
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
719
pancreas
514
connective tissue
415
adipose tissue
376
epithelium
232
liver
229
heart
224
kidney
159
bone element
121
vasculature
120
blood vessel
103
artery
52
eye
33
brain
23
musculature of body
20
limb
19
lung
16
skeleton
15
embryo
9
blood
9
bodily fluid
6
nerve
4
spleen
3
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
20
AMP-T2D consortium
assay_slims!
DNA binding
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
1
5
gastrocnemius medialis
1
4
tibial artery
1
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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