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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
1
GRO-seq
1
RRBS
1
pCHi-C
Assay category
DNA binding
15
Transcription
1
DNA methylation
Date released
8
August, 2021
4
February, 2018
2
July, 2019
2
May, 2021
1
January, 2018
1
March, 2020
Available data
16
bigWig
16
tsv
15
bam
5
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
9
cell line
7
in vitro differentiated cells
1
primary cell
1
tissue
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
1
hg18
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
18 results
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total RNA-seq
GRO-seq
RRBS
pCHi-C
cell line
H1-hESC
8
MCF-7
1
in vitro differentiated cells
pancreatic endoderm
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
primary cell
pericardium fibroblast
1
tissue
pericardium
1
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