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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
total RNA-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
DNA binding
13
DNA accessibility
4
Transcription
2
DNA methylation
Date released
8
February, 2021
8
February, 2023
3
November, 2018
1
March, 2020
October, 2017
Available data
11
bam
9
bed narrowPeak
4
bed bed3
4
txt
3
bigWig
3
fastq
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
tsv
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
723
pancreas
530
connective tissue
417
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
67
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
vein
4
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
20
AMP-T2D consortium
assay_slims!
DNA binding
month_released!
October, 2017
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
total RNA-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
2
1
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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