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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
216
total RNA-seq
177
ATAC-seq
50
ChIP-seq
34
single cell RNA-seq
22
snATAC-seq
1
pCHi-C
Assay category
177
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
65
bigWig
63
bam
39
zippedFastqFolder
38
bed narrowPeak
18
fastq
Organism
177
Homo sapiens
Biosample type
139
primary cell
38
tissue
Organ
57
pancreas
39
epithelium
20
liver
Project
138
AMP
39
HPAP
Genome assembly (visualization)
83
hg19
Lab
100
AMP-T2D consortium
39
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
177 results
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ATAC-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
pancreatic alpha cell
22
pancreatic beta cell
13
macrophage
11
+ See 26 more…
tissue
liver
20
islet of Langerhans
18
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