Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
4
single cell RNA-seq
3
Hi-C
1
pCHi-C
1
total RNA-seq
Assay category
14
DNA binding
5
Transcription
3
3D chromatin structure
DNA methylation
Target of assay
11
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
9
May, 2019
6
October, 2019
4
August, 2021
3
March, 2020
1
February, 2020
Available data
18
bam
bigWig
6
tsv
3
hic
2
bed bed3+
2
bed broadPeak
2
bedpe bed3+
2
bigBed broadPeak
2
hdf5
1
bed narrowPeak
1
bigBed narrowPeak
1
fastq
1
tar
Organism
23
Homo sapiens
Biosample type
16
tissue
7
primary cell
Organ
250
pancreas
168
epithelium
160
liver
144
kidney
122
heart
105
connective tissue
93
bone element
60
adipose tissue
59
brain
54
eye
36
blood vessel
36
vasculature
25
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
artery
12
nerve
9
spleen
8
skeleton
7
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
3
hg19
Lab
23
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA methylation
assembly!
GRCh38
organ_slims!
artery
files.file_type!
bigWig
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
Hi-C
pCHi-C
total RNA-seq
tissue
aorta
2
4
1
1
ascending aorta
3
1
thoracic aorta
4
primary cell
endothelial cell of umbilical vein
5
2
Download