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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
total RNA-seq
Assay category
4
DNA binding
2
Transcription
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
Date released
4
December, 2017
2
May, 2021
Available data
6
bam
4
bigWig
4
fastq
2
bed narrowPeak
2
tsv
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Organ
90
epithelium
84
bone element
81
pancreas
22
kidney
18
connective tissue
9
musculature of body
6
embryo
5
heart
3
brain
1
adipose tissue
1
limb
1
liver
1
stomach
1
urinary bladder
1
vasculature
Project
6
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
6
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_slims!
DNA methylation
files.file_type!
bedpe
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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