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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ChIP-seq
Assay category
131
DNA binding
Target of assay
73
histone
73
histone modification
47
transcription factor
43
broad histone mark
30
narrow histone mark
11
control
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
187
June, 2019
131
November, 2017
90
May, 2021
89
August, 2017
58
October, 2019
50
May, 2020
24
August, 2021
14
October, 2017
9
November, 2018
8
February, 2021
1
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
131
Homo sapiens
Biosample type
66
tissue
59
cell line
6
primary cell
Organ
72
brain
59
liver
4
epithelium
4
vasculature
2
blood vessel
Project
131
AMP
Genome assembly (visualization)
95
GRCh38
71
hg19
Lab
131
AMP-T2D consortium
Audit category:
13
inconsistent control read length
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
131 results
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Clear Filters
ChIP-seq
tissue
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
layer of hippocampus
14
middle frontal area 46
8
cell line
HepG2
59
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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