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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
18
total RNA-seq
4
pCHi-C
2
ChIP-seq
Assay category
28
DNA accessibility
18
Transcription
2
DNA binding
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
February, 2020
Available data
33
bed narrowPeak
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
52
Homo sapiens
Biosample type
52
tissue
Organ
207
pancreas
206
kidney
175
heart
154
epithelium
103
liver
93
bone element
84
connective tissue
52
eye
47
blood vessel
47
vasculature
43
adipose tissue
37
artery
32
musculature of body
29
brain
20
lung
9
blood
9
bodily fluid
8
skeleton
5
gonad
5
limb
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
27
hg19
Lab
52
AMP-T2D consortium
assay_slims!
DNA methylation
month_released!
February, 2020
files.file_type!
bam
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
2
pigmented layer of retina
12
2
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