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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
Assay category
3
DNA binding
2
DNA accessibility
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
June, 2019
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
893
pancreas
677
connective tissue
590
liver
485
adipose tissue
471
epithelium
383
heart
350
kidney
284
brain
233
vasculature
blood vessel
159
bone element
141
artery
121
limb
90
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
23
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
5
AMP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA methylation
month_released!
May, 2020
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
DNase-seq
primary cell
choroid plexus epithelial cell
3
1
smooth muscle cell of the brain vasculature
1
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