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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
80
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
709
February, 2021
398
May, 2021
396
November, 2017
357
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
168
July, 2018
159
May, 2022
120
May, 2019
93
December, 2017
81
July, 2019
80
April, 2019
78
November, 2018
76
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
119
bam
105
bigWig
79
bed narrowPeak
78
bigBed narrowPeak
41
fastq
26
tsv
1
csv
Organism
121
Homo sapiens
Biosample type
80
tissue
41
primary cell
Organ
57
heart
40
epithelium
40
pancreas
23
kidney
Project
121
AMP
Genome assembly (visualization)
105
hg19
104
GRCh38
Lab
121
AMP-T2D consortium
Audit category:
missing controlled_by
assay_slims!
DNA methylation
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
pancreatic cell
1
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