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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
3
Hi-C
1
MPRA
Assay category
16
Transcription
3
3D chromatin structure
3
DNA accessibility
Date released
691
February, 2021
406
November, 2017
398
May, 2021
396
August, 2017
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
125
May, 2022
120
July, 2018
120
May, 2019
94
December, 2017
80
April, 2019
80
November, 2018
78
July, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
19
fastq
3
bedpe bed3+
3
bigWig
3
cool
3
hic
1
txt
Organism
22
Homo sapiens
Biosample type
22
primary cell
1
cell line
Organ
22
epithelium
22
pancreas
Project
22
HPAP
1
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
22
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
assay_slims!
DNA methylation
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
23 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
MPRA
primary cell
pancreatic alpha cell
15
2
1
pancreatic beta cell
1
1
1
pancreatic acinar cell
1
cell line
MIN6
1
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