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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
DNA methylation
Date released
93
May, 2022
19
September, 2020
Available data
3143
bam
2913
bigWig
1605
bed narrowPeak
1423
tsv
1337
fastq
928
bigBed narrowPeak
392
tagAlign
290
bed broadPeak
253
bigBed broadPeak
241
bed bed3+
161
txt
112
zippedFastqFolder
64
xls
20
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
112
Homo sapiens
Biosample type
112
primary cell
Organ
39
epithelium
39
pancreas
Project
112
HPAP
Lab
112
Klaus Kaestner, Upenn
assay_slims!
DNA methylation
organ_slims!
artery
heart
BIOSAMPLE
ASSAY
112 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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