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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
4
July, 2019
Available data
3227
bam
3017
bigWig
1631
bed narrowPeak
1570
tsv
1334
fastq
935
bigBed narrowPeak
396
tagAlign
242
bed broadPeak
206
bigBed broadPeak
194
bed bed3+
112
zippedFastqFolder
99
txt
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
4
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
Audit category:
inconsistent assembly
assay_slims!
DNA methylation
organ_slims!
kidney
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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