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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
17
small RNA-seq
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
59
Transcription
DNA methylation
8
3D chromatin structure
7
DNA accessibility
Target of assay
3
control
Date released
701
February, 2021
406
November, 2017
398
May, 2021
396
August, 2017
341
May, 2020
284
October, 2019
205
February, 2023
189
August, 2021
168
July, 2018
159
May, 2022
137
June, 2019
115
May, 2019
94
December, 2017
81
November, 2018
76
October, 2018
74
July, 2019
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
57
April, 2019
49
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
70
bigWig
66
bam
59
tsv
6
bed narrowPeak
4
bed bed3+
4
hdf5
1
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
56
tissue
18
primary cell
Organ
17
connective tissue
16
brain
15
heart
12
adipose tissue
9
blood vessel
9
vasculature
8
liver
8
musculature of body
7
epithelium
kidney
4
limb
4
pancreas
3
artery
1
pericardium
Project
74
AMP
Genome assembly (visualization)
69
hg19
65
GRCh38
Lab
74
AMP-T2D consortium
assay_slims!
DNA methylation
organ_slims!
kidney
BIOSAMPLE
ASSAY
74 results
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total RNA-seq
small RNA-seq
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
heart left ventricle
2
2
+ See 16 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 10 more…
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