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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
DNA methylation
Date released
93
May, 2022
19
September, 2020
Available data
3352
bam
3098
bigWig
1763
bed narrowPeak
1593
tsv
1315
fastq
1029
bigBed narrowPeak
398
tagAlign
321
bed broadPeak
284
bigBed broadPeak
272
bed bed3+
161
txt
112
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
112
Homo sapiens
Biosample type
112
primary cell
Organ
39
epithelium
39
pancreas
Project
112
HPAP
Lab
112
Klaus Kaestner, Upenn
assay_slims!
DNA methylation
organ_slims!
spleen
BIOSAMPLE
ASSAY
112 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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