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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
170
ChIP-seq
Assay category
170
DNA binding
33
DNA accessibility
Target of assay
167
histone
167
histone modification
106
narrow histone mark
61
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
75
October, 2019
64
November, 2017
25
May, 2019
6
October, 2017
Available data
196
bam
172
bigWig
170
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
18
fastq
15
bed broadPeak
6
bigBed broadPeak
1
tagAlign bed3+
Organism
170
Homo sapiens
Biosample type
164
tissue
6
primary cell
Organ
413
liver
170
brain
140
pancreas
114
heart
97
epithelium
75
vasculature
73
blood vessel
58
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
14
embryo
12
spleen
10
vein
7
adipose tissue
2
eye
1
pituitary gland
Project
170
AMP
Genome assembly (visualization)
169
GRCh38
118
hg19
Lab
170
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
170 results
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ChIP-seq
tissue
layer of hippocampus
17
angular gyrus
14
temporal lobe
13
caudate nucleus
12
substantia nigra
12
+ See 61 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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