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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
8
snATAC-seq
1
ATAC-seq
1
pCHi-C
Assay category
10
DNA binding
9
DNA accessibility
Target of assay
6
control
4
histone
4
histone modification
4
narrow histone mark
Date released
8
January, 2021
4
October, 2019
3
January, 2019
3
November, 2018
1
January, 2018
1
March, 2020
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
bigBed narrowPeak
1
tsv
Organism
20
Homo sapiens
Biosample type
8
primary cell
7
cell line
5
tissue
Organ
802
pancreas
649
connective tissue
475
adipose tissue
426
liver
395
epithelium
289
heart
246
kidney
159
bone element
157
brain
150
vasculature
149
blood vessel
116
artery
54
eye
43
musculature of body
37
embryo
37
limb
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
10
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
8
T1D
Genome assembly (visualization)
1
hg19
Lab
12
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_slims!
DNA methylation
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
pCHi-C
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
tissue
islet of Langerhans
4
ovary
1
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