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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
13
DNA binding
DNA methylation
1
DNA accessibility
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
Available data
14
bam
14
fastq
10
bed narrowPeak
10
bigBed narrowPeak
10
bigWig
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
760
liver
741
pancreas
652
connective tissue
479
adipose tissue
368
epithelium
336
heart
280
brain
275
kidney
187
vasculature
182
blood vessel
147
bone element
113
limb
96
artery
89
musculature of body
42
nerve
41
blood
41
bodily fluid
37
embryo
32
eye
22
vein
20
lung
18
ureter
15
spleen
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
15
AMP-T2D consortium
assay_slims!
DNA methylation
month_released!
December, 2018
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
pCHi-C
tissue
spleen
13
1
1
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