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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
DNA methylation
Date released
93
May, 2022
19
September, 2020
Available data
2889
bam
2656
bigWig
1593
tsv
1348
bed narrowPeak
883
fastq
637
bigBed narrowPeak
389
tagAlign
273
bed broadPeak
254
bed bed3+
236
bigBed broadPeak
161
txt
112
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
1
vcf
Organism
112
Homo sapiens
Biosample type
112
primary cell
Organ
39
epithelium
39
pancreas
Project
112
HPAP
Lab
112
Klaus Kaestner, Upenn
assay_slims!
DNA methylation
target.investigated_as!
transcription factor
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
112 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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