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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
WGBS
19
RRBS
1
DNAme array
Assay category
1713
DNA binding
1712
Transcription
730
DNA accessibility
93
DNA methylation
24
3D chromatin structure
DNA sequencing
Date released
41
May, 2022
23
July, 2019
15
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
33
bed bedMethyl
33
bigBed bedMethyl
21
fastq
16
bam
16
bigWig
6
tsv
Organism
93
Homo sapiens
Biosample type
56
primary cell
36
tissue
1
cell line
Organ
53
pancreas
52
epithelium
9
heart
7
liver
6
adipose tissue
6
connective tissue
6
musculature of body
3
kidney
3
vasculature
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
46
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
47
Klaus Kaestner, Upenn
46
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_slims!
DNA sequencing
audit.ERROR.category!
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
93 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
+ See 6 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 12 more…
cell line
HepG2
1
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