Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
160
ChIP-seq
Assay category
160
DNA binding
Target of assay
135
histone
135
histone modification
71
broad histone mark
64
narrow histone mark
16
control
9
transcription factor
Date released
90
May, 2021
26
August, 2017
24
August, 2021
12
November, 2017
8
February, 2021
Available data
1485
bam
1397
bigWig
981
fastq
833
bed narrowPeak
524
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
Organism
160
Homo sapiens
Biosample type
tissue
100
primary cell
40
in vitro differentiated cells
20
cell line
Organ
16
liver
14
connective tissue
7
epithelium
6
artery
6
blood vessel
6
heart
6
vasculature
3
pancreas
Project
84
T1D
76
AMP
Genome assembly (visualization)
133
hg19
130
GRCh38
Lab
84
Kyle Gaulton, UCSD
76
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
11
inconsistent control read length
1
inconsistent assembly
assay_slims!
DNA sequencing
biosample_type!
tissue
BIOSAMPLE
ASSAY
160 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
pancreatic PP cell
3
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
Download