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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
10
MeRIP-seq
6
snATAC-seq
3
single cell RNA-seq
1
Hi-C
Assay category
81
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
5
control
5
nucleotide modification
Date released
71
August, 2021
14
May, 2023
10
November, 2020
Available data
64
bed narrowPeak
64
xls
txt
1
hic
Organism
95
Homo sapiens
Biosample type
89
tissue
6
cell line
Organ
85
kidney
10
pancreas
6
epithelium
Project
95
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
3817
AMP-T2D consortium
337
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
85
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
4
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
assay_slims!
DNA sequencing
files.file_type!
txt
BIOSAMPLE
ASSAY
95 results
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ATAC-seq
MeRIP-seq
snATAC-seq
single cell RNA-seq
Hi-C
tissue
kidney
75
6
3
1
islet of Langerhans
4
cell line
EndoC_BH1
6
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