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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
58
Transcription
12
DNA accessibility
Date released
66
February, 2021
4
February, 2023
1
May, 2021
Available data
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
71
Homo sapiens
Biosample type
70
tissue
1
primary cell
Organ
936
pancreas
788
liver
666
connective tissue
504
epithelium
490
adipose tissue
358
heart
256
brain
vasculature
225
blood vessel
211
kidney
139
artery
90
limb
71
bone element
69
blood
69
bodily fluid
54
eye
52
musculature of body
43
nerve
37
embryo
25
spleen
22
vein
20
lung
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
70
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
70
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_slims!
DNA sequencing
files.file_type!
txt
month_released!
June, 2019
organ_slims!
vasculature
BIOSAMPLE
ASSAY
71 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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primary cell
megakaryocyte
1
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