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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
3
total RNA-seq
2
DNase-seq
1
Hi-C
Assay category
8
DNA binding
3
Transcription
2
DNA accessibility
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
3
control
1
narrow histone mark
Date released
80
May, 2022
40
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
26
September, 2018
23
May, 2021
19
September, 2020
14
October, 2019
13
July, 2019
12
August, 2017
7
August, 2020
6
December, 2019
6
November, 2020
5
March, 2020
4
November, 2019
3
August, 2018
3
August, 2021
3
December, 2017
3
October, 2022
2
June, 2019
2
November, 2017
2
October, 2018
1
June, 2018
1
May, 2019
Available data
32
bam
25
bigWig
bed narrowPeak
14
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
tsv
2
bed bed3+
1
hic
1
tar
Organism
14
Homo sapiens
Biosample type
13
primary cell
1
cell line
Organ
21
eye
21
limb
15
nerve
14
epithelium
14
kidney
13
blood vessel
13
vasculature
11
brain
11
pancreas
8
vein
5
artery
4
connective tissue
4
gonad
4
ovary
3
heart
1
adipose tissue
1
liver
1
lymph node
1
pituitary gland
1
skin of body
Project
14
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA sequencing
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
7
1
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
epithelial cell of proximal tubule
1
cell line
glomerular visceral epithelial cell
1
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