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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
total RNA-seq
4
WGBS
3
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
16
Transcription
6
DNA accessibility
4
DNA methylation
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
26
fastq
10
bigWig
7
bam
4
bed bedMethyl
4
bigBed bedMethyl
3
bed narrowPeak
3
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
26
Homo sapiens
Biosample type
19
primary cell
7
tissue
Organ
53
liver
26
pancreas
19
epithelium
15
blood
15
bodily fluid
9
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
19
HPAP
7
AMP
Genome assembly (visualization)
9
GRCh38
3
hg19
Lab
19
Klaus Kaestner, Upenn
7
AMP-T2D consortium
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
WGBS
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
body of pancreas
2
2
pancreas
2
1
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