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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
181
DNase-seq
53
ChIP-seq
1
Hi-C
Assay category
181
DNA accessibility
53
DNA binding
1
3D chromatin structure
Target of assay
31
transcription factor
11
histone
11
histone modification
9
control
7
narrow histone mark
5
RNA binding protein
4
broad histone mark
2
chromatin remodeller
Date released
406
November, 2017
397
May, 2021
341
May, 2020
313
August, 2021
310
October, 2019
286
August, 2017
260
February, 2021
200
June, 2019
200
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
94
December, 2017
90
July, 2019
87
November, 2018
80
April, 2019
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
234
bam
225
bed narrowPeak
225
bigBed narrowPeak
225
bigWig
181
bed bed3+
181
bed broadPeak
181
bigBed broadPeak
35
fastq
Organism
235
Homo sapiens
Biosample type
169
tissue
38
primary cell
28
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
27
blood
27
bodily fluid
20
epithelium
connective tissue
18
ureter
7
eye
7
spleen
7
vasculature
5
blood vessel
4
pancreas
3
liver
2
artery
1
adipose tissue
Project
235
AMP
Genome assembly (visualization)
225
GRCh38
203
hg19
Lab
235
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
1
inconsistent control
assay_slims!
DNA sequencing
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
235 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
skeletal muscle satellite cell
8
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
skeletal muscle cell
1
2
+ See 13 more…
cell line
GM12878
27
HepG2
1
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