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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
ChIP-seq
166
total RNA-seq
129
ATAC-seq
113
single cell RNA-seq
56
snATAC-seq
31
DNase-seq
17
pCHi-C
10
RRBS
7
Hi-C
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
7
3D chromatin structure
Date released
4
July, 2019
1
March, 2020
1
March, 2023
1
October, 2019
Available data
4
bed bed3+
4
bigWig
4
hdf5
3
hic
1
bedpe bed3+
Organism
7
Homo sapiens
Biosample type
12
tissue
7
primary cell
4
in vitro differentiated cells
2
cell line
Organ
7
epithelium
4
blood vessel
4
vasculature
3
brain
pancreas
2
vein
1
connective tissue
1
liver
Project
6
AMP
1
ITG
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
1
ITG
Audit category:
1
audit script error
assay_slims!
DNA sequencing
organ_slims!
pancreas
BIOSAMPLE
ASSAY
7 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
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