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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
snATAC-seq
11
ATAC-seq
9
total RNA-seq
4
ChIP-seq
Assay category
29
DNA accessibility
9
Transcription
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
18
February, 2023
16
January, 2021
7
March, 2020
1
May, 2021
Available data
6
bam
6
bigWig
4
bed narrowPeak
2
tsv
Organism
42
Homo sapiens
Biosample type
30
tissue
8
primary cell
4
cell line
Organ
34
pancreas
8
blood
8
bodily fluid
4
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
821
AMP
152
HPAP
42
T1D
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
34
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
42 results
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snATAC-seq
ATAC-seq
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
6
11
7
2
pancreas
4
primary cell
peripheral blood mononuclear cell
8
cell line
EndoC_BH1
2
2
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