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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
6
RRBS
Assay category
47
DNA methylation
39
DNA accessibility
Date released
80
May, 2022
6
July, 2019
Available data
317
bam
301
bigWig
257
fastq
156
tsv
151
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
86
Homo sapiens
Biosample type
86
primary cell
Organ
86
epithelium
86
pancreas
8
heart
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
80
HPAP
6
AMP
Genome assembly (visualization)
6
hg19
Lab
80
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
86 results
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WGBS
ATAC-seq
RRBS
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
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