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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
DNase-seq
6
ChIP-seq
Assay category
46
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
44
June, 2019
4
November, 2017
4
October, 2019
Available data
527
bam
524
bigWig
342
bed narrowPeak
323
tsv
257
fastq
170
bigBed narrowPeak
80
zippedFastqFolder
52
bed broadPeak
52
bigBed broadPeak
51
bed bed3+
14
bed bedMethyl
14
bigBed bedMethyl
13
tagAlign
9
hic
8
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
52
Homo sapiens
Biosample type
27
tissue
25
primary cell
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
52
AMP
Genome assembly (visualization)
50
GRCh38
43
hg19
Lab
52
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
52 results
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DNase-seq
ChIP-seq
tissue
heart
18
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
heart right ventricle
1
+ See 1 more…
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
+ See 9 more…
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