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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
Assay category
37
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
37
November, 2017
21
November, 2018
11
October, 2018
8
August, 2017
6
January, 2019
5
May, 2019
5
May, 2021
5
May, 2024
4
April, 2019
4
December, 2017
4
June, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
37
bam
37
fastq
35
bed narrowPeak
35
bigBed narrowPeak
35
bigWig
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
37
Homo sapiens
Biosample type
34
cell line
3
primary cell
Organ
34
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
37
AMP
Genome assembly (visualization)
34
hg19
31
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
assay_slims!
DNA sequencing
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
cell line
HepG2
34
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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