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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
FAIRE-seq
1
snATAC-seq
Assay category
Transcription
5
DNA accessibility
3
DNA binding
Date released
3
February, 2023
1
May, 2022
1
October, 2019
Available data
492
bed narrowPeak
389
bam
350
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
musculature of body
1
vasculature
1
vein
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
3
Struan F.A. Grant, CHOP
2
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
5 results
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ATAC-seq
FAIRE-seq
snATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
primary cell
endothelial cell of umbilical vein
1
tissue
skeletal muscle tissue
1
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