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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
22
snATAC-seq
Assay category
61
DNA accessibility
Transcription
41
DNA methylation
Date released
180
August, 2017
129
February, 2021
124
May, 2020
102
May, 2022
95
October, 2019
93
November, 2017
84
May, 2021
46
February, 2023
46
March, 2020
36
July, 2019
32
August, 2021
29
October, 2018
23
May, 2019
22
December, 2017
16
January, 2021
15
April, 2019
14
November, 2018
11
May, 2023
11
October, 2017
10
April, 2020
10
November, 2020
8
February, 2018
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
4
January, 2019
4
November, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
101
zippedFastqFolder
bed narrowPeak
20
bigWig
18
bam
18
fastq
1
bed bed3+
1
txt
Organism
102
Homo sapiens
Biosample type
101
primary cell
1
tissue
Organ
80
epithelium
80
pancreas
1
musculature of body
Project
101
HPAP
1
AMP
Genome assembly (visualization)
1
hg19
Lab
101
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
Transcription
assay_title!
whole genome sequencing assay
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
102 results
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WGBS
ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
tissue
skeletal muscle tissue
1
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