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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
404
ChIP-seq
Assay category
404
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
other context
2
other post-translational modification
Date released
404
November, 2017
322
August, 2017
283
October, 2019
218
June, 2019
217
May, 2021
151
May, 2020
139
August, 2021
139
May, 2022
125
February, 2021
120
May, 2019
111
February, 2023
94
December, 2017
84
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
3
September, 2020
1
August, 2018
1
March, 2023
1
October, 2022
Available data
390
bam
332
bigWig
322
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
69
bed broadPeak
63
bigBed broadPeak
3
tar
Organism
404
Homo sapiens
Biosample type
313
cell line
82
tissue
9
primary cell
Organ
313
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
404
AMP
Genome assembly (visualization)
279
hg19
278
GRCh38
Lab
404
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
audit.ERROR.category!
audit script error
target.investigated_as!
other context
BIOSAMPLE
ASSAY
404 results
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Clear Filters
ChIP-seq
cell line
HepG2
313
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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