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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
18
snATAC-seq
17
pCHi-C
11
ATAC-seq
Assay category
Transcription
86
DNA binding
29
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
Date released
101
May, 2021
16
January, 2021
13
February, 2023
2
March, 2020
Available data
86
bam
86
bed narrowPeak
86
bigWig
84
tagAlign
Organism
132
Homo sapiens
Biosample type
108
primary cell
24
tissue
cell line
Organ
23
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
2136
AMP
147
HPAP
132
T1D
10
LungMap
1
ITG
Genome assembly (visualization)
86
GRCh38
86
hg19
Lab
130
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
biosample_type!
cell line
BIOSAMPLE
ASSAY
132 results
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ChIP-seq
snATAC-seq
pCHi-C
ATAC-seq
primary cell
monocyte
84
1
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
+ See 11 more…
tissue
islet of Langerhans
2
6
11
pancreas
4
thymus
1
See all biosamples
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