Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
21
ATAC-seq
8
ChIP-seq
3
snDrop-seq
1
pCHi-C
Assay category
Transcription
21
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
397
November, 2017
263
August, 2017
252
October, 2019
163
June, 2019
135
August, 2021
117
February, 2021
115
May, 2019
99
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
66
May, 2021
51
May, 2020
48
March, 2020
41
November, 2019
39
May, 2022
35
December, 2018
30
July, 2019
25
January, 2019
24
February, 2018
23
October, 2017
11
May, 2023
10
April, 2020
10
November, 2020
8
January, 2018
8
January, 2021
6
September, 2017
5
March, 2019
2
December, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
84
txt
25
bam
22
bed narrowPeak
8
tagAlign
5
bigWig
4
bed bedgraph
3
tsv
1
bed bed3
1
bed bed3+
Organism
117
Homo sapiens
Biosample type
95
tissue
primary cell
18
cell line
4
in vitro differentiated cells
Organ
92
bone element
14
artery
14
blood vessel
14
heart
14
vasculature
8
skeleton
6
limb
4
connective tissue
3
kidney
2
liver
Project
117
AMP
Genome assembly (visualization)
27
hg19
22
GRCh38
Lab
117
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
1
inconsistent replicate
assay_slims!
Transcription
biosample_type!
primary cell
BIOSAMPLE
ASSAY
117 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 7 more…
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
adipocyte
4
See all biosamples
Download