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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
ChIP-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
176
DNA binding
Transcription
14
DNA methylation
5
DNA accessibility
Target of assay
124
histone modification
123
histone
73
broad histone mark
50
narrow histone mark
29
control
23
transcription factor
2
RNA binding protein
Date released
220
October, 2019
195
August, 2017
163
June, 2019
115
May, 2019
95
February, 2021
82
November, 2017
81
February, 2023
80
April, 2019
74
October, 2018
73
August, 2021
50
May, 2020
48
December, 2017
39
May, 2022
31
March, 2020
30
July, 2019
26
November, 2018
23
October, 2017
21
November, 2019
11
May, 2023
10
April, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
November, 2020
2
December, 2019
2
January, 2018
1
August, 2022
1
May, 2021
Available data
89
bigWig
86
fastq
81
bam
66
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
22
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
188
Homo sapiens
Biosample type
195
tissue
68
in vitro differentiated cells
59
primary cell
Organ
58
pancreas
57
adipose tissue
57
connective tissue
54
liver
26
musculature of body
Project
195
AMP
Genome assembly (visualization)
91
hg19
69
GRCh38
Lab
195
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
assay_slims!
Transcription
BIOSAMPLE
ASSAY
195 results
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Clear Filters
ChIP-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
liver
48
3
1
islet of Langerhans
42
1
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
14
white adipose tissue
12
adipose tissue
2
3
right lobe of liver
1
1
subcutaneous adipose tissue
1
See all biosamples
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