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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
8
DNA accessibility
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
61
October, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
110
bam
92
bed narrowPeak
87
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
79
Homo sapiens
Biosample type
79
tissue
Organ
534
liver
459
pancreas
299
epithelium
221
brain
197
heart
193
connective tissue
151
kidney
150
vasculature
148
blood vessel
97
bone element
88
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
54
musculature of body
38
eye
36
nerve
24
spleen
23
embryo
18
vein
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
79
AMP
Genome assembly (visualization)
56
GRCh38
56
hg19
Lab
79
AMP-T2D consortium
assay_slims!
Transcription
files.file_type!
hdf5
bigBed broadPeak
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
1
tibial artery
23
1
muscle of leg
7
1
gastrocnemius medialis
4
distal epiphysis of femur
1
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