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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
21
snATAC-seq
1
Hi-C
Assay category
60
DNA accessibility
Transcription
41
DNA methylation
1
3D chromatin structure
Date released
101
May, 2022
1
March, 2019
Available data
1986
bam
1777
bed narrowPeak
1727
bigWig
1042
bigBed narrowPeak
987
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
101
zippedFastqFolder
89
txt
64
xls
56
tsv
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
102
Homo sapiens
Biosample type
101
primary cell
1
tissue
Organ
81
pancreas
80
epithelium
Project
101
HPAP
1
AMP
Genome assembly (visualization)
1
hg19
Lab
101
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
assay_slims!
Transcription
BIOSAMPLE
ASSAY
102 results
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WGBS
ATAC-seq
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
tissue
islet of Langerhans
1
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